Using Copernicus Sentinel-2 and Sentinel-3 data to monitor harmful algal blooms in Southern Chile during the COVID-19 lockdown.
Identifieur interne : 000963 ( Main/Exploration ); précédent : 000962; suivant : 000964Using Copernicus Sentinel-2 and Sentinel-3 data to monitor harmful algal blooms in Southern Chile during the COVID-19 lockdown.
Auteurs : Cristina V. Rodríguez-Benito [Chili] ; Gabriel Navarro [Espagne] ; Isabel Caballero [Espagne]Source :
- Marine pollution bulletin [ 1879-3363 ] ; 2020.
Descripteurs français
- KwdFr :
- MESH :
- Wicri :
- geographic : Chili.
English descriptors
- KwdEn :
- MESH :
- geographic : Chile.
- Animals, COVID-19, Dinoflagellida, Harmful Algal Bloom, Humans, Pandemics, Phytoplankton, SARS-CoV-2.
Abstract
During the southern summer of 2020, large phytoplankton blooms were detected using satellite technology in Chile (western Patagonia), where intensive salmonid aquaculture is carried out. Some harvesting sites recorded massive fish mortalities, which were associated with the presence of the dinoflagellate species Cochlodinium sp. The bloom included other phytoplankton species, as Lepidodinium chlorophorum, which persistently changed the colour of the ocean to green. These blooms coincided with the government-managed emergency lockdown due to the COVID-19 pandemic. Local in situ sampling was slowed down. However, imagery from the Copernicus programme allowed operational monitoring. This study shows the benefits of both Sentinel-3 and Sentinel-2 satellites in terms of their spectral, spatial and temporal capabilities for improved algal bloom monitoring. These novel tools, which can foster optimal decision-making, are available for delivering early alerts in situations of natural catastrophes and blockages, such as those occurred during the global COVID-19 lockdown.
DOI: 10.1016/j.marpolbul.2020.111722
PubMed: 33039790
PubMed Central: PMC7544481
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Using Copernicus Sentinel-2 and Sentinel-3 data to monitor harmful algal blooms in Southern Chile during the COVID-19 lockdown.</title><author><name sortKey="Rodriguez Benito, Cristina V" sort="Rodriguez Benito, Cristina V" uniqKey="Rodriguez Benito C" first="Cristina V" last="Rodríguez-Benito">Cristina V. Rodríguez-Benito</name><affiliation wicri:level="1"><nlm:affiliation>Mariscope Ingeniería, Puerto Montt, Chile.</nlm:affiliation><country xml:lang="fr">Chili</country><wicri:regionArea>Mariscope Ingeniería, Puerto Montt</wicri:regionArea><wicri:noRegion>Puerto Montt</wicri:noRegion></affiliation></author><author><name sortKey="Navarro, Gabriel" sort="Navarro, Gabriel" uniqKey="Navarro G" first="Gabriel" last="Navarro">Gabriel Navarro</name><affiliation wicri:level="1"><nlm:affiliation>Instituto de Ciencias Marinas de Andalucía (ICMAN), Consejo Superior de Investigaciones Científicas (CSIC), Puerto Real 11510, Cádiz, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Instituto de Ciencias Marinas de Andalucía (ICMAN), Consejo Superior de Investigaciones Científicas (CSIC), Puerto Real 11510, Cádiz</wicri:regionArea><wicri:noRegion>Cádiz</wicri:noRegion></affiliation></author><author><name sortKey="Caballero, Isabel" sort="Caballero, Isabel" uniqKey="Caballero I" first="Isabel" last="Caballero">Isabel Caballero</name><affiliation wicri:level="1"><nlm:affiliation>Instituto de Ciencias Marinas de Andalucía (ICMAN), Consejo Superior de Investigaciones Científicas (CSIC), Puerto Real 11510, Cádiz, Spain. Electronic address: Isabel.caballero@icman.csic.es.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Instituto de Ciencias Marinas de Andalucía (ICMAN), Consejo Superior de Investigaciones Científicas (CSIC), Puerto Real 11510, Cádiz</wicri:regionArea><wicri:noRegion>Cádiz</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2020">2020</date><idno type="RBID">pubmed:33039790</idno><idno type="pmid">33039790</idno><idno type="doi">10.1016/j.marpolbul.2020.111722</idno><idno type="pmc">PMC7544481</idno><idno type="wicri:Area/Main/Corpus">001329</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">001329</idno><idno type="wicri:Area/Main/Curation">001329</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">001329</idno><idno type="wicri:Area/Main/Exploration">001329</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Using Copernicus Sentinel-2 and Sentinel-3 data to monitor harmful algal blooms in Southern Chile during the COVID-19 lockdown.</title><author><name sortKey="Rodriguez Benito, Cristina V" sort="Rodriguez Benito, Cristina V" uniqKey="Rodriguez Benito C" first="Cristina V" last="Rodríguez-Benito">Cristina V. Rodríguez-Benito</name><affiliation wicri:level="1"><nlm:affiliation>Mariscope Ingeniería, Puerto Montt, Chile.</nlm:affiliation><country xml:lang="fr">Chili</country><wicri:regionArea>Mariscope Ingeniería, Puerto Montt</wicri:regionArea><wicri:noRegion>Puerto Montt</wicri:noRegion></affiliation></author><author><name sortKey="Navarro, Gabriel" sort="Navarro, Gabriel" uniqKey="Navarro G" first="Gabriel" last="Navarro">Gabriel Navarro</name><affiliation wicri:level="1"><nlm:affiliation>Instituto de Ciencias Marinas de Andalucía (ICMAN), Consejo Superior de Investigaciones Científicas (CSIC), Puerto Real 11510, Cádiz, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Instituto de Ciencias Marinas de Andalucía (ICMAN), Consejo Superior de Investigaciones Científicas (CSIC), Puerto Real 11510, Cádiz</wicri:regionArea><wicri:noRegion>Cádiz</wicri:noRegion></affiliation></author><author><name sortKey="Caballero, Isabel" sort="Caballero, Isabel" uniqKey="Caballero I" first="Isabel" last="Caballero">Isabel Caballero</name><affiliation wicri:level="1"><nlm:affiliation>Instituto de Ciencias Marinas de Andalucía (ICMAN), Consejo Superior de Investigaciones Científicas (CSIC), Puerto Real 11510, Cádiz, Spain. Electronic address: Isabel.caballero@icman.csic.es.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Instituto de Ciencias Marinas de Andalucía (ICMAN), Consejo Superior de Investigaciones Científicas (CSIC), Puerto Real 11510, Cádiz</wicri:regionArea><wicri:noRegion>Cádiz</wicri:noRegion></affiliation></author></analytic><series><title level="j">Marine pollution bulletin</title><idno type="eISSN">1879-3363</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals (MeSH)</term><term>COVID-19 (MeSH)</term><term>Chile (MeSH)</term><term>Dinoflagellida (MeSH)</term><term>Harmful Algal Bloom (MeSH)</term><term>Humans (MeSH)</term><term>Pandemics (MeSH)</term><term>Phytoplankton (MeSH)</term><term>SARS-CoV-2 (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Animaux (MeSH)</term><term>Chili (MeSH)</term><term>Dinoflagellida (MeSH)</term><term>Humains (MeSH)</term><term>Pandémies (MeSH)</term><term>Phytoplancton (MeSH)</term><term>Prolifération d'algues nuisibles (MeSH)</term></keywords><keywords scheme="MESH" type="geographic" xml:lang="en"><term>Chile</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Animals</term><term>COVID-19</term><term>Dinoflagellida</term><term>Harmful Algal Bloom</term><term>Humans</term><term>Pandemics</term><term>Phytoplankton</term><term>SARS-CoV-2</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Animaux</term><term>Chili</term><term>Dinoflagellida</term><term>Humains</term><term>Pandémies</term><term>Phytoplancton</term><term>Prolifération d'algues nuisibles</term></keywords><keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Chili</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">During the southern summer of 2020, large phytoplankton blooms were detected using satellite technology in Chile (western Patagonia), where intensive salmonid aquaculture is carried out. Some harvesting sites recorded massive fish mortalities, which were associated with the presence of the dinoflagellate species Cochlodinium sp. The bloom included other phytoplankton species, as Lepidodinium chlorophorum, which persistently changed the colour of the ocean to green. These blooms coincided with the government-managed emergency lockdown due to the COVID-19 pandemic. Local in situ sampling was slowed down. However, imagery from the Copernicus programme allowed operational monitoring. This study shows the benefits of both Sentinel-3 and Sentinel-2 satellites in terms of their spectral, spatial and temporal capabilities for improved algal bloom monitoring. These novel tools, which can foster optimal decision-making, are available for delivering early alerts in situations of natural catastrophes and blockages, such as those occurred during the global COVID-19 lockdown.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" IndexingMethod="Automated" Owner="NLM"><PMID Version="1">33039790</PMID><DateCompleted><Year>2020</Year><Month>12</Month><Day>14</Day></DateCompleted><DateRevised><Year>2021</Year><Month>01</Month><Day>10</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1879-3363</ISSN><JournalIssue CitedMedium="Internet"><Volume>161</Volume><Issue>Pt A</Issue><PubDate><Year>2020</Year><Month>Dec</Month></PubDate></JournalIssue><Title>Marine pollution bulletin</Title><ISOAbbreviation>Mar Pollut Bull</ISOAbbreviation></Journal><ArticleTitle>Using Copernicus Sentinel-2 and Sentinel-3 data to monitor harmful algal blooms in Southern Chile during the COVID-19 lockdown.</ArticleTitle><Pagination><MedlinePgn>111722</MedlinePgn></Pagination><ELocationID EIdType="pii" ValidYN="Y">S0025-326X(20)30840-7</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.1016/j.marpolbul.2020.111722</ELocationID><Abstract><AbstractText>During the southern summer of 2020, large phytoplankton blooms were detected using satellite technology in Chile (western Patagonia), where intensive salmonid aquaculture is carried out. Some harvesting sites recorded massive fish mortalities, which were associated with the presence of the dinoflagellate species Cochlodinium sp. The bloom included other phytoplankton species, as Lepidodinium chlorophorum, which persistently changed the colour of the ocean to green. These blooms coincided with the government-managed emergency lockdown due to the COVID-19 pandemic. Local in situ sampling was slowed down. However, imagery from the Copernicus programme allowed operational monitoring. This study shows the benefits of both Sentinel-3 and Sentinel-2 satellites in terms of their spectral, spatial and temporal capabilities for improved algal bloom monitoring. These novel tools, which can foster optimal decision-making, are available for delivering early alerts in situations of natural catastrophes and blockages, such as those occurred during the global COVID-19 lockdown.</AbstractText><CopyrightInformation>Copyright © 2020 Elsevier Ltd. All rights reserved.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Rodríguez-Benito</LastName><ForeName>Cristina V</ForeName><Initials>CV</Initials><AffiliationInfo><Affiliation>Mariscope Ingeniería, Puerto Montt, Chile.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Navarro</LastName><ForeName>Gabriel</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>Instituto de Ciencias Marinas de Andalucía (ICMAN), Consejo Superior de Investigaciones Científicas (CSIC), Puerto Real 11510, Cádiz, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Caballero</LastName><ForeName>Isabel</ForeName><Initials>I</Initials><AffiliationInfo><Affiliation>Instituto de Ciencias Marinas de Andalucía (ICMAN), Consejo Superior de Investigaciones Científicas (CSIC), Puerto Real 11510, Cádiz, Spain. Electronic address: Isabel.caballero@icman.csic.es.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>10</Month><Day>08</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Mar Pollut Bull</MedlineTA><NlmUniqueID>0260231</NlmUniqueID><ISSNLinking>0025-326X</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D000086382" MajorTopicYN="Y">COVID-19</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D002677" MajorTopicYN="N" Type="Geographic">Chile</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004141" MajorTopicYN="Y">Dinoflagellida</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D057097" MajorTopicYN="N">Harmful Algal Bloom</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D006801" MajorTopicYN="N">Humans</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D058873" MajorTopicYN="N">Pandemics</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010839" MajorTopicYN="N">Phytoplankton</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D000086402" MajorTopicYN="N">SARS-CoV-2</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">COVID-19 lockdown</Keyword><Keyword MajorTopicYN="N">Copernicus programme</Keyword><Keyword MajorTopicYN="N">Dinoflagellates</Keyword><Keyword MajorTopicYN="N">Harmful algal blooms</Keyword><Keyword MajorTopicYN="N">Remote sensing</Keyword><Keyword MajorTopicYN="N">Salmonid aquaculture</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2020</Year><Month>07</Month><Day>08</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2020</Year><Month>09</Month><Day>23</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2020</Year><Month>09</Month><Day>23</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2020</Year><Month>10</Month><Day>12</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>12</Month><Day>15</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2020</Year><Month>10</Month><Day>11</Day><Hour>20</Hour><Minute>28</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">33039790</ArticleId><ArticleId IdType="pii">S0025-326X(20)30840-7</ArticleId><ArticleId IdType="doi">10.1016/j.marpolbul.2020.111722</ArticleId><ArticleId IdType="pmc">PMC7544481</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Mar Pollut Bull. 2020 Jan;150:110789</Citation><ArticleIdList><ArticleId IdType="pubmed">31910528</ArticleId></ArticleIdList></Reference><Reference><Citation>Ann Rev Mar Sci. 2012;4:143-76</Citation><ArticleIdList><ArticleId IdType="pubmed">22457972</ArticleId></ArticleIdList></Reference><Reference><Citation>Harmful Algae. 2016 Mar;53:53-63</Citation><ArticleIdList><ArticleId IdType="pubmed">28073445</ArticleId></ArticleIdList></Reference><Reference><Citation>Geohealth. 2020 Jun 20;4(6):e2019GH000238</Citation><ArticleIdList><ArticleId IdType="pubmed">32577605</ArticleId></ArticleIdList></Reference><Reference><Citation>Harmful Algae. 2017 Mar;63:32-44</Citation><ArticleIdList><ArticleId IdType="pubmed">28366398</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Rep. 2018 Jan 22;8(1):1330</Citation><ArticleIdList><ArticleId IdType="pubmed">29358586</ArticleId></ArticleIdList></Reference><Reference><Citation>Mar Pollut Bull. 2020 Feb;151:110825</Citation><ArticleIdList><ArticleId IdType="pubmed">32056617</ArticleId></ArticleIdList></Reference><Reference><Citation>Harmful Algae. 2018 Mar;73:129-137</Citation><ArticleIdList><ArticleId IdType="pubmed">29602501</ArticleId></ArticleIdList></Reference><Reference><Citation>Harmful Algae. 2020 Jan;91:101731</Citation><ArticleIdList><ArticleId IdType="pubmed">32057341</ArticleId></ArticleIdList></Reference><Reference><Citation>Glob Chang Biol. 2014 Dec;20(12):3845-58</Citation><ArticleIdList><ArticleId IdType="pubmed">24942916</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Total Environ. 2020 Aug 1;728:138813</Citation><ArticleIdList><ArticleId IdType="pubmed">32334159</ArticleId></ArticleIdList></Reference><Reference><Citation>Mar Pollut Bull. 2020 May;154:111048</Citation><ArticleIdList><ArticleId IdType="pubmed">32174498</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Rep. 2020 May 26;10(1):8743</Citation><ArticleIdList><ArticleId IdType="pubmed">32457388</ArticleId></ArticleIdList></Reference><Reference><Citation>Opt Express. 2016 Oct 31;24(22):A1471-A1488</Citation><ArticleIdList><ArticleId IdType="pubmed">27828530</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Biol Sci. 2019 Jun 12;286(1904):20190340</Citation><ArticleIdList><ArticleId IdType="pubmed">31161913</ArticleId></ArticleIdList></Reference><Reference><Citation>Mar Pollut Bull. 2020 Jan;150:110603</Citation><ArticleIdList><ArticleId IdType="pubmed">31784267</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2008 May 23;320(5879):1011</Citation><ArticleIdList><ArticleId IdType="pubmed">18497274</ArticleId></ArticleIdList></Reference><Reference><Citation>Environ Monit Assess. 2015 Feb;187(2):51</Citation><ArticleIdList><ArticleId IdType="pubmed">25638059</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Total Environ. 2020 Aug 20;731:139012</Citation><ArticleIdList><ArticleId IdType="pubmed">32388159</ArticleId></ArticleIdList></Reference><Reference><Citation>Geohealth. 2020 Aug 25;4(9):e2020GH000254</Citation><ArticleIdList><ArticleId IdType="pubmed">32864541</ArticleId></ArticleIdList></Reference><Reference><Citation>Harmful Algae. 2016 Mar;53:160-166</Citation><ArticleIdList><ArticleId IdType="pubmed">28073441</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Chili</li><li>Espagne</li></country></list><tree><country name="Chili"><noRegion><name sortKey="Rodriguez Benito, Cristina V" sort="Rodriguez Benito, Cristina V" uniqKey="Rodriguez Benito C" first="Cristina V" last="Rodríguez-Benito">Cristina V. Rodríguez-Benito</name></noRegion></country><country name="Espagne"><noRegion><name sortKey="Navarro, Gabriel" sort="Navarro, Gabriel" uniqKey="Navarro G" first="Gabriel" last="Navarro">Gabriel Navarro</name></noRegion><name sortKey="Caballero, Isabel" sort="Caballero, Isabel" uniqKey="Caballero I" first="Isabel" last="Caballero">Isabel Caballero</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/LockdownV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000963 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000963 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Sante
|area= LockdownV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:33039790
|texte= Using Copernicus Sentinel-2 and Sentinel-3 data to monitor harmful algal blooms in Southern Chile during the COVID-19 lockdown.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:33039790" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a LockdownV1
| This area was generated with Dilib version V0.6.38. |  |